C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulation of nuclear pre-mRNA domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090791 Rprd2-201 ENSMUSG00000028106 10090 - 3:95759873-95818953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090791 2.040±1.05 5.095±0.43 4.758±0.18 7.560±2.20 2.702±1.95 4.533±0.94 1.286±0.29 2.304±1.53 2.575±0.82 3.342±1.73 1.213±0.00 3.721±2.47 2.768±1.63 3.215±1.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053N CIL_00053N_0002 CGP 3:95739976-95818953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016591 ISS DNA-directed RNA polymerase II, holoenzyme

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369067 RPRD2-003 protein_coding Homo_sapiens 0 686
ENST00000369068 RPRD2-002 protein_coding Homo_sapiens 0 5027
ENST00000401000 RPRD2-001 protein_coding Homo_sapiens 0 4885
ENST00000492220 RPRD2-004 processed_transcript Homo_sapiens 0 4885

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