C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nestin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090973 Nes-001 ENSMUSG00000004891 10090 + 3:87971093-87980451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090973
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090973 3.765±0.57 2.000±0.28 1.609±0.06 11.332±0.40 2.361±0.44 0.506±0.19 2.761±0.88 3.202±0.63 0.685±0.29 12.048±1.99 3.985±0.86 3.931±3.64 4.674±3.79 0.161±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000850 CIL_000850_0002 VISTA 3:87682625-88286876
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 IEA G2/M transition of mitotic cell cycle
GO:0005198 IEA structural molecule activity
GO:0005622 IDA intracellular
GO:0005737 IDA cytoplasm
GO:0005882 IDA intermediate filament
GO:0007399 IDA nervous system development
GO:0007420 ISS brain development
GO:0019215 ISS intermediate filament binding
GO:0030844 ISS positive regulation of intermediate filament depolymerization
GO:0031076 ISS embryonic camera-type eye development
GO:0032091 IEA negative regulation of protein binding
GO:0043086 IEA negative regulation of catalytic activity
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045111 IEA intermediate filament cytoskeleton
GO:0048858 IMP cell projection morphogenesis
GO:0072089 IEA stem cell proliferation
GO:2000179 ISS positive regulation of neural precursor cell proliferation

Homologs

No Homologs available.

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