C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 4950
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091905 Gm4950-201 ENSMUSG00000069379 10090 - 18:51865264-51865881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000091905
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000091905 0.457±0.22 0.146±0.06 0.403±0.30 0.107±0.09 0.262±0.20 0.169±0.11 0.155±0.02 0.138±0.05 0.227±0.16 0.175±0.11 0.110±0.01 0.643±0.50 0.089±0.08 0.152±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005839 IEA proteasome core complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000610434 PSMB3-006 protein_coding Homo_sapiens 0 569
ENST00000613870 PSMB3-002 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000619426 PSMB3-001 protein_coding Homo_sapiens 0 782
ENST00000619951 PSMB3-201 protein_coding Homo_sapiens 0 782
ENST00000620309 PSMB3-003 nonsense_mediated_decay Homo_sapiens 0 399

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