C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, beta type, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610434 PSMB3-006 ENSG00000277791 9606 + 17:38752747-38760580 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalENST00000610434
Transcript ID Adipose Adrenal
ENST00000610434 23.384±0.00 30.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QW CIL_0005QW_0001 CGP 17:38733897-38764231
CIL_0000SI CIL_0000SI_0001 CGP 17:38752736-38800126

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005839 IEA proteasome core complex
GO:0051603 IEA proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103147 Psmb3-001 protein_coding Mus_musculus 0 614
ENSMUST00000171547 Gm6467-201 pseudogene Mus_musculus 0 592
ENSMUST00000093326 Gm5356-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000091905 Gm4950-201 protein_coding Mus_musculus 0 569
ENSMUST00000122325 Gm13649-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000119431 Gm14227-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000119318 Gm6884-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000138265 Psmb3-002 retained_intron Mus_musculus 0 435

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