C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092074 Stat6-001 ENSMUSG00000002147 10090 + 10:127642986-127660957 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000092074
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000092074 41.873±6.72 37.435±2.38 34.963±1.18 2.286±0.14 43.330±4.40 31.653±4.19 16.441±2.49 24.702±1.25 13.385±3.21 42.965±1.83 6.376±1.39 28.744±7.86 9.348±2.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000790 IDA nuclear chromatin
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0002296 IGI T-helper 1 cell lineage commitment
GO:0002829 IGI negative regulation of type 2 immune response
GO:0003677 IDA DNA binding
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0007165 IMP signal transduction
GO:0019221 IEA cytokine-mediated signaling pathway
GO:0019903 IEA protein phosphatase binding
GO:0033598 IMP mammary gland epithelial cell proliferation
GO:0034097 IEA response to cytokine
GO:0035771 IMP interleukin-4-mediated signaling pathway
GO:0042127 IDA regulation of cell proliferation
GO:0042802 IEA identical protein binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045121 IEA membrane raft
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0048295 IGI positive regulation of isotype switching to IgE isotypes
GO:0060443 IMP mammary gland morphogenesis
GO:0070301 IEA cellular response to hydrogen peroxide
GO:1902170 IEA cellular response to reactive nitrogen species

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300131 NAB2-001 protein_coding Homo_sapiens 0.00000000004 75
ENST00000300134 STAT6-001 protein_coding Homo_sapiens 0 2715
ENST00000342556 NAB2-002 protein_coding Homo_sapiens 0.0000000001 73
ENST00000454075 STAT6-004 protein_coding Homo_sapiens 0 2639
ENST00000537215 STAT6-006 protein_coding Homo_sapiens 0 2466
ENST00000538913 STAT6-008 protein_coding Homo_sapiens 0 2351
ENST00000543873 STAT6-003 protein_coding Homo_sapiens 0 2623
ENST00000553275 STAT6-018 protein_coding Homo_sapiens 0 231
ENST00000553397 STAT6-020 protein_coding Homo_sapiens 0 484
ENST00000553499 STAT6-010 protein_coding Homo_sapiens 0 510
ENST00000553533 STAT6-014 protein_coding Homo_sapiens 0 712
ENST00000554663 STAT6-023 protein_coding Homo_sapiens 0 370
ENST00000554764 STAT6-007 nonsense_mediated_decay Homo_sapiens 0 2348
ENST00000554825 STAT6-019 protein_coding Homo_sapiens 0 361
ENST00000555104 STAT6-017 nonsense_mediated_decay Homo_sapiens 0 198
ENST00000555222 STAT6-005 retained_intron Homo_sapiens 0 715
ENST00000555318 STAT6-013 protein_coding Homo_sapiens 0 411
ENST00000555375 STAT6-015 protein_coding Homo_sapiens 0 763
ENST00000555641 STAT6-025 retained_intron Homo_sapiens 0 665
ENST00000555849 STAT6-021 protein_coding Homo_sapiens 0 518
ENST00000556155 STAT6-002 protein_coding Homo_sapiens 0 2623
ENST00000556259 STAT6-024 protein_coding Homo_sapiens 0 331
ENST00000557563 STAT6-011 retained_intron Homo_sapiens 0 412
ENST00000557635 STAT6-022 protein_coding Homo_sapiens 0 254

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