C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AHNAK nucleoprotein (desmoyokin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000092956 Ahnak-202 ENSMUSG00000069833 10090 + 19:8989284-9019195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000092956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000092956 25.479±3.24 1.958±0.60 50.944±2.37 1.041±0.22 14.620±2.62 19.392±5.03 9.549±1.88 4.189±0.93 0.423±0.17 44.480±3.44 7.649±3.50 12.202±6.64 26.401±17.68 0.745±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760
CIL_0001Z2 CIL_0001Z2_0002 CGP 19:8967041-9076919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0005886 ISS plasma membrane
GO:0005911 ISS cell-cell junction
GO:0005925 IEA focal adhesion
GO:0015629 ISS actin cytoskeleton
GO:0016020 IEA membrane
GO:0030315 IDA T-tubule
GO:0031982 ISS vesicle
GO:0043034 IDA costamere
GO:0043484 IDA regulation of RNA splicing
GO:0044291 ISS cell-cell contact zone
GO:0044548 IEA S100 protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0045121 ISS membrane raft
GO:0051259 IMP protein oligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0097493 IMP structural molecule activity conferring elasticity
GO:1901385 IEA regulation of voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257247 AHNAK-001 protein_coding Homo_sapiens 0 660
ENST00000378024 AHNAK-005 protein_coding Homo_sapiens 0 6669
ENST00000528508 AHNAK-009 protein_coding Homo_sapiens 0 608
ENST00000530124 AHNAK-011 protein_coding Homo_sapiens 0 477
ENST00000530285 AHNAK-007 protein_coding Homo_sapiens 0 689
ENST00000531324 AHNAK-010 protein_coding Homo_sapiens 0 377
ENST00000533365 AHNAK-013 protein_coding Homo_sapiens 0 562

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