C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AHNAK nucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378024 AHNAK-005 ENSG00000124942 9606 - 11:62515905-62546835 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378024
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378024 19.880±0.00 36.630±0.00 8.253±5.49 94.593±0.05 38.738±17.60 28.453±21.06 8.620±0.38 43.930±36.21 104.643±33.38 33.946±14.84 27.527±22.10 26.381±6.48 5.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 NAS nucleus
GO:0005737 IDA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0005925 IDA focal adhesion
GO:0015629 IDA actin cytoskeleton
GO:0016020 IDA membrane
GO:0030315 NAS T-tubule
GO:0031982 IDA vesicle
GO:0042383 NAS sarcolemma
GO:0043034 ISS costamere
GO:0043484 ISS regulation of RNA splicing
GO:0044291 IDA cell-cell contact zone
GO:0044548 IPI S100 protein binding
GO:0044822 IDA poly(A) RNA binding
GO:0045121 IDA membrane raft
GO:0051259 ISS protein oligomerization
GO:0070062 IDA extracellular vesicular exosome
GO:0097493 ISS structural molecule activity conferring elasticity
GO:1901385 IMP regulation of voltage-gated calcium channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092956 Ahnak-202 protein_coding Mus_musculus 0 6669
ENSMUST00000092955 Ahnak-201 protein_coding Mus_musculus 0 675

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