C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093951 Spata1-002 ENSMUSG00000028188 10090 - 3:146485411-146495115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaENSMUST00000093951
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000093951 0.866±0.11 0.613±0.11 0.691±0.00 0.877±0.21 0.440±0.21 0.322±0.01 0.391±0.00 0.354±0.06 0.266±0.05 2.037±0.90 0.466±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370638 SPATA1-007 processed_transcript Homo_sapiens 0 532
ENST00000431031 SPATA1-001 processed_transcript Homo_sapiens 0 532
ENST00000473108 SPATA1-005 processed_transcript Homo_sapiens 0 230
ENST00000485121 SPATA1-006 processed_transcript Homo_sapiens 0 407
ENST00000490879 SPATA1-008 processed_transcript Homo_sapiens 0 532
ENST00000554297 SPATA1-009 transcribed_unprocessed_pseudogene Homo_sapiens 0 431
ENST00000611416 CYP20A1-201 protein_coding Homo_sapiens 0.0000000005 73

Loading