C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbonic anhydrase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094365 Car1-001 ENSMUSG00000027556 10090 - 3:14766217-14778459 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094365
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094365 0.863±0.48 0.306±0.15 0.090±0.01 0.007±0.00 0.493±0.02 2186.357±163.85 0.060±0.01 0.063±0.04 3.883±1.55 4.601±4.35 0.146±0.03 0.190±0.06 0.047±0.02 0.101±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006T1 CIL_0006T1_0002 CGP 3:14641727-14808368
CIL_0006T2 CIL_0006T2_0002 CGP 3:14766216-14872351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004089 IEA carbonate dehydratase activity
GO:0005737 IEA cytoplasm
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000431316 CA1-201 protein_coding Homo_sapiens 0 680
ENST00000517429 CA1-017 nonsense_mediated_decay Homo_sapiens 0 250
ENST00000517590 CA1-010 protein_coding Homo_sapiens 0 479
ENST00000517618 CA1-015 protein_coding Homo_sapiens 0 647
ENST00000518341 CA1-018 processed_transcript Homo_sapiens 0 361
ENST00000519991 CA1-019 protein_coding Homo_sapiens 0 331
ENST00000520093 CA1-016 retained_intron Homo_sapiens 0 250
ENST00000520663 CA1-011 protein_coding Homo_sapiens 0 261
ENST00000520990 CA1-009 retained_intron Homo_sapiens 0 250
ENST00000521679 CA1-022 protein_coding Homo_sapiens 0 418
ENST00000521846 CA1-004 protein_coding Homo_sapiens 0 405
ENST00000522389 CA1-020 protein_coding Homo_sapiens 0 228
ENST00000522579 CA1-006 protein_coding Homo_sapiens 0 403
ENST00000522662 CA1-014 protein_coding Homo_sapiens 0 316
ENST00000522814 CA1-013 protein_coding Homo_sapiens 0 399
ENST00000523022 CA1-003 protein_coding Homo_sapiens 0 680
ENST00000523712 CA1-023 retained_intron Homo_sapiens 0 383
ENST00000523858 CA1-005 protein_coding Homo_sapiens 0 298
ENST00000523953 CA1-001 protein_coding Homo_sapiens 0 680
ENST00000524324 CA1-021 protein_coding Homo_sapiens 0 436
ENST00000542576 CA1-202 protein_coding Homo_sapiens 0 680

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