C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUZ RNA binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000094549 Szrd1-002 ENSMUSG00000040842 10090 - 4:141113001-141139775 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094549 13.544±1.46 26.589±1.99 5.698±0.19 4.322±2.58 15.041±3.43 25.937±1.72 7.055±2.27 16.250±1.96 9.761±3.53 16.653±0.92 10.414±3.18 13.882±5.83 9.577±4.62 1.165±0.50

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401088 SZRD1-001 protein_coding Homo_sapiens 0 1411
ENST00000401089 SZRD1-005 protein_coding Homo_sapiens 0 1554
ENST00000466212 SPATA21-003 processed_transcript Homo_sapiens 0 220
ENST00000471507 SZRD1-007 protein_coding Homo_sapiens 0 872
ENST00000472351 SZRD1-004 processed_transcript Homo_sapiens 0 859
ENST00000472461 SZRD1-003 processed_transcript Homo_sapiens 0 691
ENST00000475078 SZRD1-010 processed_transcript Homo_sapiens 0 228
ENST00000475554 SZRD1-008 processed_transcript Homo_sapiens 0 573
ENST00000476423 SZRD1-011 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000486763 SZRD1-009 processed_transcript Homo_sapiens 0 536
ENST00000492354 SZRD1-006 protein_coding Homo_sapiens 0 1467
ENST00000541551 RP11-611O2.2-001 processed_pseudogene Homo_sapiens 0 272

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