C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB7, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095048 Rab7-003 ENSMUSG00000079477 10090 - 6:87999940-88019783 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095048
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095048 38.363±8.73 23.792±4.64 54.264±7.75 37.535±24.07 20.937±1.49 33.898±9.12 34.835±3.48 22.288±6.64 29.478±1.33 24.877±1.81 33.001±9.46 50.466±15.72 15.241±3.58

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005764 ISO lysosome
GO:0005770 IDA late endosome
GO:0005794 IDA Golgi apparatus
GO:0006886 TAS intracellular protein transport
GO:0007264 IEA small GTPase mediated signal transduction
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0045022 ISS early endosome to late endosome transport
GO:0045335 ISS phagocytic vesicle
GO:0090383 ISS phagosome acidification
GO:0090385 ISS phagosome-lysosome fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123608 RAB7A (3 of 3)-202 protein_coding Danio_rerio 0 468
ENSDART00000113926 RAB7A (3 of 3)-201 protein_coding Danio_rerio 0 457
ENST00000265062 RAB7A-001 protein_coding Homo_sapiens 0 1048
ENST00000464496 RAB7A-006 protein_coding Homo_sapiens 0 627
ENST00000482525 RAB7A-004 protein_coding Homo_sapiens 0 503
ENST00000483906 RAB7A-011 protein_coding Homo_sapiens 0 379
ENST00000485280 RAB7A-012 protein_coding Homo_sapiens 0 241
ENST00000490093 RAB7A-009 protein_coding Homo_sapiens 0 388
ENST00000491681 RAB7A-007 retained_intron Homo_sapiens 0 241
ENST00000493186 RAB7A-010 protein_coding Homo_sapiens 0 231

Loading