C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB7, member RAS oncogene family
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000079477 Rab7 10090 - 6:87999106-88045270 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095048 Rab7-003 87999940-88019783 protein_coding
  ENSMUST00000113596 Rab7-005 87999805-88045245 protein_coding
  ENSMUST00000113597 Rab7-004 87999443-88019783 protein_coding
  ENSMUST00000113598 Rab7-002 87999117-88045017 protein_coding
  ENSMUST00000113600 Rab7-001 87999106-88045270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095048ENSMUST00000113597ENSMUST00000113598ENSMUST00000113600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095048 38.363±8.73 23.792±4.64 N/A 54.264±7.75 37.535±24.07 20.937±1.49 33.898±9.12 34.835±3.48 22.288±6.64 29.478±1.33 24.877±1.81 33.001±9.46 50.466±15.72 15.241±3.58
ENSMUST00000113597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.142±0.00 N/A
ENSMUST00000113598 N/A N/A N/A N/A 25.801±0.00 N/A N/A N/A N/A N/A N/A 59.356±1.16 17.724±0.00 N/A
ENSMUST00000113600 95.005±9.08 99.462±15.03 135.020±35.88 69.688±20.41 67.335±22.46 87.626±13.74 69.577±9.88 141.965±13.78 81.181±8.66 121.477±12.98 91.206±12.81 67.743±29.94 59.653±34.97 14.762±6.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005764 ISO lysosome
GO:0005770 IDA late endosome
GO:0005794 IDA Golgi apparatus
GO:0006622 IEA protein targeting to lysosome
GO:0006886 TAS intracellular protein transport
GO:0007174 IEA epidermal growth factor catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008333 IEA endosome to lysosome transport
GO:0019003 IEA GDP binding
GO:0031410 IEA cytoplasmic vesicle
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0045022 ISS early endosome to late endosome transport
GO:0045335 ISS phagocytic vesicle
GO:0045453 IEA bone resorption
GO:0048365 IEA Rac GTPase binding
GO:0070062 IEA extracellular vesicular exosome
GO:0090383 ISS phagosome acidification
GO:0090385 ISS phagosome-lysosome fusion
GO:0097208 IEA alveolar lamellar body
GO:2000785 IEA regulation of autophagic vacuole assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020497 rab7 RAB7, member RAS oncogene family protein_coding Danio_rerio
ENSDARG00000021287 RAB7A (2 of 3) RAB7A, member RAS oncogene family protein_coding Danio_rerio
ENSDARG00000087243 RAB7A (3 of 3) RAB7A, member RAS oncogene family protein_coding Danio_rerio
ENSG00000075785 RAB7A RAB7A, member RAS oncogene family protein_coding Homo_sapiens

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