C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRKC, apoptosis, WT1, regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095313 Pawr-201 ENSMUSG00000035873 10090 + 10:108332189-108414391 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095313 4.249±2.31 3.239±1.56 15.869±1.53 1.361±0.63 2.168±0.97 21.030±3.83 0.853±0.44 9.817±0.78 2.397±0.88 8.972±2.43 0.463±0.15 20.353±12.64 42.805±30.04 1.593±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000884 CIL_000884_0002 VISTA 10:108287857-108889362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0019899 IEA enzyme binding
GO:0030889 IMP negative regulation of B cell proliferation
GO:0042094 IMP interleukin-2 biosynthetic process
GO:0042130 IMP negative regulation of T cell proliferation
GO:0042986 IDA positive regulation of amyloid precursor protein biosynthetic process
GO:0043522 IEA leucine zipper domain binding
GO:0050860 IMP negative regulation of T cell receptor signaling pathway
GO:0097190 IGI apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328827 PAWR-001 protein_coding Homo_sapiens 0 1024
ENST00000547016 PAWR-003 processed_transcript Homo_sapiens 0 244
ENST00000547571 PAWR-005 processed_transcript Homo_sapiens 0 243
ENST00000548426 PAWR-002 protein_coding Homo_sapiens 3e-35 154
ENST00000550006 PAWR-004 processed_transcript Homo_sapiens 0 243
ENST00000551712 PAWR-006 protein_coding Homo_sapiens 0 390
ENST00000552637 PAWR-008 protein_coding Homo_sapiens 3e-35 154

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