C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PRKC, apoptosis, WT1, regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328827 PAWR-001 ENSG00000177425 9606 - 12:79584874-79691097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328827
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328827 2.050±0.00 2.240±0.00 0.604±0.21 3.864±1.06 3.832±0.94 0.947±0.00 4.218±0.00 3.669±2.66 3.701±1.65 0.175±0.00 4.514±1.75 1.501±0.49 4.099±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BE CIL_0002BE_0002 CGP 12:78863993-79691097
CIL_000884 CIL_000884_0001 VISTA 12:79045453-79646790
CIL_0002BD CIL_0002BD_0002 CGP 12:79574979-79935460

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003714 TAS transcription corepressor activity
GO:0003779 ISS actin binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005884 ISS actin filament
GO:0006351 IEA transcription, DNA-templated
GO:0006915 ISS apoptotic process
GO:0008285 TAS negative regulation of cell proliferation
GO:0019899 IDA enzyme binding
GO:0030889 IEA negative regulation of B cell proliferation
GO:0042094 IEA interleukin-2 biosynthetic process
GO:0042130 IEA negative regulation of T cell proliferation
GO:0042986 IEA positive regulation of amyloid precursor protein biosynthetic process
GO:0043065 NAS positive regulation of apoptotic process
GO:0043522 IPI leucine zipper domain binding
GO:0050860 IEA negative regulation of T cell receptor signaling pathway
GO:0051017 ISS actin filament bundle assembly
GO:0097190 IEA apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095313 Pawr-201 protein_coding Mus_musculus 0 1024

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