C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095517 Cog8-002 ENSMUSG00000031916 10090 - 8:107046289-107056689 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaENSMUST00000095517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000095517 2.877±0.00 20.735±0.00 5.114±1.14 6.736±1.53 4.147±0.08 4.173±1.09 2.930±0.79 3.223±0.19 4.585±0.71 3.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KB CIL_0008KB_0002 VISTA 8:107038845-107639359
CIL_0004IA CIL_0004IA_0002 CGP 8:107044698-107056689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 IEA Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306875 COG8-001 protein_coding Homo_sapiens 0 1988
ENST00000562081 COG8-003 protein_coding Homo_sapiens 0 1871
ENST00000562595 COG8-006 protein_coding Homo_sapiens 0 671
ENST00000563634 RP11-343C2.9-001 protein_coding Homo_sapiens 0 568
ENST00000564737 RP11-343C2.7-001 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000567493 COG8-002 protein_coding Homo_sapiens 0 416
ENST00000570293 RP11-343C2.7-002 nonsense_mediated_decay Homo_sapiens 0 337

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