C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004IA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000258429-ENSG00000272617 CGP 9606 16:69328621-69334871
GeneTranscriptPositionBiotype
ENSG00000258429 (PDF)
peptide deformylase (mitochondrial) 		ENST00000288022 (PDF-001) 69328621-69330595 protein_coding
CIL_0004IA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078931-ENSMUSG00000031916 CGP 10090 8:107044698-107056689
GeneTranscriptPositionBiotype
ENSMUSG00000031913 (Vps4a)
vacuolar protein sorting 4a (yeast) 		ENSMUST00000034388 (Vps4a-001) 107031222-107045755 protein_coding
ENSMUST00000132096 (Vps4a-003) 107042255-107043106 retained_intron
ENSMUST00000144527 (Vps4a-002) 107039019-107042687 retained_intron
ENSMUSG00000031916 (Cog8)
component of oligomeric golgi complex 8 		ENSMUST00000034391 (Cog8-001) 107046295-107056684 protein_coding
ENSMUST00000095517 (Cog8-002) 107046289-107056689 protein_coding
ENSMUST00000122903 (Cog8-004) 107052678-107054257 retained_intron
ENSMUST00000134772 (Cog8-003) 107052908-107056498 nonsense_mediated_decay
ENSMUSG00000078931 (Pdf)
peptide deformylase (mitochondrial) 		ENSMUST00000055316 (Pdf-002) 107046520-107048614 protein_coding
ENSMUST00000154271 (Pdf-001) 107044698-107047186 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IA_0001ENSG00000258429ENST00000288022CIL_0004IA_0002ENSMUSG00000031913ENSMUST00000034388ENSMUST00000132096ENSMUST00000144527ENSMUSG00000031916ENSMUST00000034391ENSMUST00000095517ENSMUST00000122903ENSMUST00000134772ENSMUSG00000078931ENSMUST00000055316ENSMUST00000154271
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004IA_0001ENSG00000258429ENST00000288022CIL_0004IA_0002ENSMUSG00000031913ENSMUST00000034388ENSMUSG00000031916ENSMUST00000034391ENSMUST00000095517ENSMUSG00000078931ENSMUST00000055316
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000258429 ENST00000288022 N/A N/A N/A N/A N/A N/A N/A N/A 55.696±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031913 ENSMUST00000034388 19.997±5.03 25.405±1.51 19.467±1.02 37.327±1.93 20.601±7.87 17.069±1.69 18.678±1.31 18.830±1.77 9.308±2.09 17.850±0.71 23.993±3.29 20.921±3.63 19.392±4.09 58.505±13.95
ENSMUST00000132096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031916 ENSMUST00000034391 7.905±0.56 N/A 7.457±0.57 10.994±0.08 17.563±0.00 N/A 4.679±1.45 6.060±0.91 6.242±1.78 6.019±0.00 9.683±0.63 10.860±0.32 8.050±3.16 26.536±4.24
ENSMUST00000095517 2.877±0.00 20.735±0.00 5.114±1.14 6.736±1.53 4.147±0.08 4.173±1.09 N/A N/A 2.930±0.79 3.223±0.19 N/A 4.585±0.71 3.110±0.00 N/A
ENSMUST00000122903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000078931 ENSMUST00000055316 14.696±0.80 81.837±16.19 13.600±1.30 N/A 26.802±1.29 19.166±4.26 27.407±1.74 17.188±3.44 12.749±3.70 19.202±7.31 20.086±1.07 43.605±10.78 12.437±3.13 N/A
ENSMUST00000154271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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