C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: intersectin 1 (SH3 domain protein 1A)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095909 Itsn1-002 ENSMUSG00000022957 10090 + 16:91729370-91832353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverENSMUST00000095909
Transcript ID Adrenal Breast Liver
ENSMUST00000095909 1.474±0.00 1.939±0.00 2.836±2.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078C CIL_00078C_0002 CGP 16:91677268-91931687
CIL_0005TE CIL_0005TE_0002 CGP 16:91684398-91931687
CIL_00078A CIL_00078A_0002 CGP 16:91689322-91920597

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0007264 IDA small GTPase mediated signal transduction
GO:0019209 IDA kinase activator activity
GO:0030027 IDA lamellipodium
GO:0030139 IDA endocytic vesicle
GO:0042327 IDA positive regulation of phosphorylation
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0051897 IDA positive regulation of protein kinase B signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379960 ITSN1-201 protein_coding Homo_sapiens 0 1509
ENST00000381283 ITSN1-036 protein_coding Homo_sapiens 0 804
ENST00000381285 ITSN1-202 protein_coding Homo_sapiens 0 1461
ENST00000381291 ITSN1-002 protein_coding Homo_sapiens 0 2263
ENST00000381318 ITSN1-001 protein_coding Homo_sapiens 0 2263
ENST00000399338 ITSN1-203 protein_coding Homo_sapiens 0 2056
ENST00000399349 ITSN1-003 protein_coding Homo_sapiens 0 2257
ENST00000399352 ITSN1-024 protein_coding Homo_sapiens 0 2261
ENST00000399353 ITSN1-025 protein_coding Homo_sapiens 0 1461
ENST00000399355 ITSN1-037 protein_coding Homo_sapiens 0 2257
ENST00000399367 ITSN1-023 protein_coding Homo_sapiens 0 2263
ENST00000437442 ITSN1-204 protein_coding Homo_sapiens 0 1469
ENST00000444491 ITSN1-033 protein_coding Homo_sapiens 0 486
ENST00000456489 ITSN1-017 protein_coding Homo_sapiens 0 230
ENST00000470742 ITSN1-034 processed_transcript Homo_sapiens 0 359
ENST00000488166 ITSN1-019 processed_transcript Homo_sapiens 0 577

Loading