C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adenomatosis polyposis coli down-regulated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096554 Apcdd1-201 ENSMUSG00000071847 10090 + 18:62922327-62953195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryTestisENSMUST00000096554
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Testis
ENSMUST00000096554 38.932±24.09 3.336±1.46 13.537±0.00 5.224±0.05 1.206±0.40 0.556±0.05 0.012±0.00 1.070±0.26 12.455±1.91 0.460±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021J CIL_00021J_0002 CGP 18:62922327-62999450

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001942 IEA hair follicle development
GO:0005887 ISS integral component of plasma membrane
GO:0016055 IEA Wnt signaling pathway
GO:0017147 ISS Wnt-protein binding
GO:0030178 ISS negative regulation of Wnt signaling pathway
GO:0043615 IDA astrocyte cell migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355285 APCDD1-001 protein_coding Homo_sapiens 0 1729
ENST00000423585 APCDD1-002 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000579685 APCDD1-005 nonsense_mediated_decay Homo_sapiens 0 656

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