C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 9C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096751 Ttc9c-001 ENSMUSG00000071660 10090 - 19:8809075-8819333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096751
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096751 4.906±2.71 2.137±1.19 7.362±0.00 8.061±4.00 3.319±0.90 3.709±0.66 2.261±0.12 4.533±0.39 7.419±4.88 3.357±0.23 3.029±0.21 4.245±1.73 6.880±2.89 1.716±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IBA protein peptidyl-prolyl isomerization
GO:0003755 IBA peptidyl-prolyl cis-trans isomerase activity
GO:0005528 IBA FK506 binding
GO:0005789 IBA endoplasmic reticulum membrane
GO:0061077 IBA chaperone-mediated protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294161 TTC9C-003 nonsense_mediated_decay Homo_sapiens 0 285
ENST00000316461 TTC9C-001 protein_coding Homo_sapiens 0 665
ENST00000530625 TTC9C-004 protein_coding Homo_sapiens 0 496
ENST00000532583 TTC9C-002 protein_coding Homo_sapiens 0 665

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