C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097715 Mrpl43-201 ENSMUSG00000025208 10090 - 19:45005014-45006442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097715
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097715 38.888±3.72 80.799±9.86 30.904±4.22 41.746±9.99 33.802±16.44 77.577±10.47 32.354±8.27 54.378±5.00 38.200±8.65 35.160±5.99 20.468±1.28 56.292±19.45 35.449±12.22 25.984±7.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_000940 CIL_000940_0002 VISTA 19:44925545-45526320

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111486 mrpl43-201 protein_coding Danio_rerio 0.000000000001 79
ENST00000299179 MRPL43-007 protein_coding Homo_sapiens 0 459
ENST00000318325 MRPL43-002 protein_coding Homo_sapiens 0 459
ENST00000318364 MRPL43-004 protein_coding Homo_sapiens 0 472
ENST00000342071 MRPL43-201 protein_coding Homo_sapiens 0 459
ENST00000370234 MRPL43-001 protein_coding Homo_sapiens 0 459
ENST00000370236 MRPL43-012 protein_coding Homo_sapiens 0 472
ENST00000370241 MRPL43-008 protein_coding Homo_sapiens 0 459
ENST00000370242 MRPL43-006 protein_coding Homo_sapiens 0 459
ENST00000448244 MRPL43-009 protein_coding Homo_sapiens 0 451
ENST00000477279 MRPL43-010 protein_coding Homo_sapiens 0 248
ENST00000487059 MRPL43-011 retained_intron Homo_sapiens 0 248
ENST00000493646 MRPL43-005 processed_transcript Homo_sapiens 0 363
ENST00000523148 MRPL43-013 protein_coding Homo_sapiens 0 344

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