C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318364 MRPL43-004 ENSG00000055950 9606 - 10:100986276-100987515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000318364
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000318364 3.471±0.00 5.026±0.00 8.093±0.00 7.594±5.72 15.923±0.00 7.531±0.00 14.971±0.00 24.249±0.00 39.449±0.00 33.902±17.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BC CIL_0008BC_0001 VISTA 10:100387324-100989228
CIL_0008BD CIL_0008BD_0001 VISTA 10:100486833-101088338
CIL_0007U1 CIL_0007U1_0001 VISTA 10:100491715-101092615
CIL_000940 CIL_000940_0001 VISTA 10:100919065-101519843
CIL_0001CA CIL_0001CA_0002 CGP 10:100969458-100987515

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 NAS structural constituent of ribosome
GO:0005761 NAS mitochondrial ribosome
GO:0006412 NAS translation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097715 Mrpl43-201 protein_coding Mus_musculus 0 472
ENSDART00000111486 mrpl43-201 protein_coding Danio_rerio 0.00000000000002 84

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