C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: artemin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097913 Artn-001 ENSMUSG00000028539 10090 - 4:117926163-117929497 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000097913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000097913 0.912±0.72 0.097±0.00 1.303±0.11 0.247±0.17 0.262±0.12 1.662±0.29 0.052±0.02 0.213±0.09 0.128±0.12 0.716±0.16 0.953±0.42 0.214±0.17 2.459±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SF CIL_0008SF_0002 VISTA 4:117346906-117947610
CIL_0009B8 CIL_0009B8_0002 VISTA 4:117528714-118131599

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0007166 ISA cell surface receptor signaling pathway
GO:0007411 IDA axon guidance
GO:0007422 IMP peripheral nervous system development
GO:0008083 IEA growth factor activity
GO:0030116 ISO glial cell line-derived neurotrophic factor receptor binding
GO:0050930 IDA induction of positive chemotaxis
GO:0061146 IMP Peyer's patch morphogenesis
GO:0097021 IMP lymphocyte migration into lymphoid organs

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372354 ARTN-002 protein_coding Homo_sapiens 0 575
ENST00000372359 ARTN-001 protein_coding Homo_sapiens 0 562
ENST00000414809 ARTN-201 protein_coding Homo_sapiens 0 514
ENST00000438616 ARTN-010 protein_coding Homo_sapiens 0 507
ENST00000498139 ARTN-003 protein_coding Homo_sapiens 0 514

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