C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098109 Pigo-001 ENSMUSG00000028454 10090 - 4:43017635-43025756 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098109 0.970±0.37 2.420±0.45 1.346±0.21 3.205±2.13 1.464±0.26 2.407±1.00 1.322±0.38 1.547±0.48 1.806±1.08 1.661±0.15 0.755±0.18 1.669±0.30 1.972±0.94 3.258±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SE CIL_0005SE_0002 CGP 4:43002343-43025819
CIL_00072V CIL_00072V_0002 CGP 4:43017635-43031710

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016780 TAS phosphotransferase activity, for other substituted phosphate groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298004 PIGO-002 protein_coding Homo_sapiens 0 1395
ENST00000361778 PIGO-201 protein_coding Homo_sapiens 0 1395
ENST00000378617 PIGO-001 protein_coding Homo_sapiens 0 3328
ENST00000465745 PIGO-004 retained_intron Homo_sapiens 0 1882
ENST00000472208 PIGO-005 processed_transcript Homo_sapiens 0 673
ENST00000474436 PIGO-003 retained_intron Homo_sapiens 0 1450
ENST00000491687 PIGO-007 processed_transcript Homo_sapiens 0 255

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