C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378617 PIGO-001 ENSG00000165282 9606 - 9:35088691-35096548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000378617
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000378617 2.667±0.00 1.904±0.00 1.010±0.00 1.439±0.00 0.525±0.07 0.557±0.00 2.900±1.87 1.066±0.85 1.650±0.00 0.612±0.00 2.264±1.77 4.000±2.16 3.060±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SE CIL_0005SE_0001 CGP 9:35073835-35096601
CIL_00072V CIL_00072V_0001 CGP 9:35088688-35103195

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006501 TAS C-terminal protein lipidation
GO:0006506 ISS GPI anchor biosynthetic process
GO:0008152 IEA metabolic process
GO:0008484 IEA sulfuric ester hydrolase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016254 TAS preassembly of GPI anchor in ER membrane
GO:0016740 IEA transferase activity
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098109 Pigo-001 protein_coding Mus_musculus 0 3328
ENSMUST00000067481 Pigo-002 protein_coding Mus_musculus 0 2634
ENSMUST00000149333 Pigo-003 protein_coding Mus_musculus 0 1389
ENSMUST00000155429 Pigo-005 processed_transcript Mus_musculus 0 486

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