C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 3a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098371 Slco3a1-002 ENSMUSG00000025790 10090 - 7:74275419-74554633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098371 4.276±0.29 2.971±0.13 9.181±0.71 2.621±1.14 4.512±1.04 3.259±1.44 21.501±3.41 9.678±1.24 0.896±0.39 52.073±6.55 11.737±1.16 16.033±9.96 2.784±1.18 21.724±5.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GT CIL_0001GT_0002 CGP 7:73939119-74554780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318445 SLCO3A1-001 protein_coding Homo_sapiens 0 2712
ENST00000424469 SLCO3A1-002 protein_coding Homo_sapiens 0 2839
ENST00000553653 SLCO3A1-003 retained_intron Homo_sapiens 0 2359
ENST00000555210 SLCO3A1-013 nonsense_mediated_decay Homo_sapiens 0 798
ENST00000555513 SLCO3A1-011 processed_transcript Homo_sapiens 0 359
ENST00000555549 SLCO3A1-005 processed_transcript Homo_sapiens 0 1676
ENST00000555769 SLCO3A1-006 processed_transcript Homo_sapiens 0 2012
ENST00000555892 SLCO3A1-012 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000556649 SLCO3A1-009 processed_transcript Homo_sapiens 0 501
ENST00000564072 SLCO3A1-014 retained_intron Homo_sapiens 0 359
ENST00000566477 SLCO3A1-015 retained_intron Homo_sapiens 2.94273e-44 183

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