C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Spi-B transcription factor (Spi-1/PU.1 related)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098483 Spib-202 ENSMUSG00000008193 10090 - 7:44525995-44532071 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungOvaryPlacentaENSMUST00000098483
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Ovary Placenta
ENSMUST00000098483 0.186±0.09 0.047±0.00 3.470±1.29 1.528±0.00 0.185±0.02 0.349±0.32 0.669±0.09 0.227±0.05 0.187±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005667 IC transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030225 IDA macrophage differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.0000003 62
ENST00000270632 SPIB-003 protein_coding Homo_sapiens 0 652
ENST00000439922 SPIB-201 protein_coding Homo_sapiens 0 516
ENST00000595883 SPIB-001 protein_coding Homo_sapiens 0 673
ENST00000596074 SPIB-002 protein_coding Homo_sapiens 0 516
ENST00000599632 CTD-2545M3.6-001 protein_coding Homo_sapiens 0 673

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