C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099337 Plxnc1-001 ENSMUSG00000074785 10090 - 10:94790866-94944578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099337 0.531±0.28 0.202±0.06 0.240±0.01 9.020±4.15 2.530±0.66 0.196±0.07 0.356±0.07 0.281±0.07 1.796±0.39 2.667±0.56 0.092±0.03 8.857±2.50 0.223±0.08 1.890±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XW CIL_0003XW_0002 CGP 10:94790866-95324097

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258526 PLXNC1-001 protein_coding Homo_sapiens 0 6639
ENST00000545312 PLXNC1-004 protein_coding Homo_sapiens 0 2239
ENST00000547057 PLXNC1-003 protein_coding Homo_sapiens 0 2974
ENST00000549187 PLXNC1-009 retained_intron Homo_sapiens 0 335
ENST00000549217 PLXNC1-002 nonsense_mediated_decay Homo_sapiens 0 1520

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