C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003XW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015278-ENSDARG00000028192 CGP 7955 4:17351306-17484750
GeneTranscriptPositionBiotype
ENSDARG00000015278 (plxnc1)
plexin C1
ENSDART00000004222 (plxnc1-201) 17351306-17384995 protein_coding
ENSDART00000135735 (plxnc1-001) 17351306-17384096 protein_coding
ENSDARG00000028192 (cradd)
CASP2 and RIPK1 domain containing adaptor with death domain
ENSDART00000033717 (cradd-001) 17451437-17484750 protein_coding
CIL_0003XW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074785-ENSMUSG00000045867 CGP 10090 10:94790866-95324097
GeneTranscriptPositionBiotype
ENSMUSG00000045867 (Cradd)
CASP2 and RIPK1 domain containing adaptor with death domain
ENSMUST00000053594 (Cradd-201) 95174746-95324097 protein_coding
ENSMUSG00000074785 (Plxnc1)
plexin C1
ENSMUST00000099337 (Plxnc1-001) 94790866-94944578 protein_coding
ENSMUST00000180514 (Plxnc1-002) 94837211-94843808 retained_intron
ENSMUST00000180573 (Plxnc1-004) 94870830-94922657 retained_intron
ENSMUST00000181244 (Plxnc1-003) 94854452-94871048 nonsense_mediated_decay
ENSMUSG00000088608 (Gm24186)
predicted gene, 24186
ENSMUST00000157983 (Gm24186-201) 94821529-94821655 rRNA
ENSMUSG00000089146 (Gm25266)
predicted gene, 25266
ENSMUST00000158521 (Gm25266-201) 94948590-94948893 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XW_0001ENSDARG00000015278ENSDART00000004222ENSDART00000135735ENSDARG00000028192ENSDART00000033717CIL_0003XW_0002ENSMUSG00000045867ENSMUST00000053594ENSMUSG00000074785ENSMUST00000099337ENSMUST00000180514ENSMUST00000180573ENSMUST00000181244ENSMUSG00000088608ENSMUST00000157983ENSMUSG00000089146ENSMUST00000158521
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003XW_0001ENSDARG00000015278ENSDART00000004222ENSDART00000135735ENSDARG00000028192ENSDART00000033717CIL_0003XW_0002ENSMUSG00000045867ENSMUST00000053594ENSMUSG00000074785ENSMUST00000099337ENSMUSG00000088608ENSMUST00000157983ENSMUSG00000089146ENSMUST00000158521
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015278 ENSDART00000004222 N/A N/A N/A N/A N/A N/A N/A N/A 0.153±0.00 N/A N/A N/A N/A N/A
ENSDART00000135735 N/A N/A N/A 1.712±0.00 N/A N/A 0.455±0.02 3.008±0.15 N/A N/A N/A N/A N/A N/A
ENSDARG00000028192 ENSDART00000033717 N/A N/A N/A 1.744±1.49 N/A N/A 2.398±0.22 1.157±0.00 0.081±0.00 N/A 1.224±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045867 ENSMUST00000053594 4.362±0.72 11.866±1.48 4.171±0.27 2.465±0.96 7.218±2.52 6.640±0.51 3.425±1.65 6.060±1.74 5.700±4.25 5.057±1.78 3.290±0.49 11.596±4.43 1.320±0.39 0.267±0.11
ENSMUSG00000074785 ENSMUST00000099337 0.531±0.28 0.202±0.06 0.240±0.01 9.020±4.15 2.530±0.66 0.196±0.07 0.356±0.07 0.281±0.07 1.796±0.39 2.667±0.56 0.092±0.03 8.857±2.50 0.223±0.08 1.890±0.45
ENSMUST00000180514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088608 ENSMUST00000157983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.067±0.00
ENSMUSG00000089146 ENSMUST00000158521 0.243±0.00 N/A 0.029±0.00 N/A 0.530±0.40 N/A N/A 0.185±0.00 0.117±0.04 0.228±0.00 N/A 1.389±0.90 0.158±0.17 0.753±0.48

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