C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cholinergic receptor, muscarinic 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099589 Chrm5-001 ENSMUSG00000074939 10090 - 2:112479171-112480769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainKidneyLiverLungOvaryTestisENSMUST00000099589
Transcript ID Adipose Adrenal Bladder Brain Kidney Liver Lung Ovary Testis
ENSMUST00000099589 0.018±0.00 0.039±0.00 0.060±0.01 0.232±0.15 0.017±0.00 0.006±0.00 0.021±0.00 0.072±0.03 0.149±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZA CIL_0000ZA_0002 CGP 2:112454997-112480769
CIL_0003HM CIL_0003HM_0002 CGP 2:112479171-112634573

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0005887 IEA integral component of plasma membrane
GO:0006821 TAS chloride transport
GO:0015872 IDA dopamine transport
GO:0016907 IEA G-protein coupled acetylcholine receptor activity
GO:0016934 TAS extracellular-glycine-gated chloride channel activity
GO:0019226 IDA transmission of nerve impulse
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane
GO:0060304 IEA regulation of phosphatidylinositol dephosphorylation
GO:1902476 TAS chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000012932 chrm5a-201 protein_coding Danio_rerio 0 207
ENST00000383263 CHRM5-001 protein_coding Homo_sapiens 0 1912
ENST00000557872 CHRM5-002 protein_coding Homo_sapiens 0 1912

Loading