C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003HM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069598-ENSDARG00000002894 CGP 7955 20:29254245-29295270
GeneTranscriptPositionBiotype
ENSDARG00000002894 (aven)
apoptosis, caspase activation inhibitor 		ENSDART00000019759 (aven-001) 29257464-29295270 protein_coding
ENSDART00000147064 (aven-002) 29257523-29290061 retained_intron
ENSDARG00000069598 (chrm5b)
cholinergic receptor, muscarinic 5b 		ENSDART00000101418 (chrm5b-001) 29254245-29255751 protein_coding
ENSDART00000156564 (chrm5b-201) 29254245-29255768 protein_coding
ENSDARG00000071331 (ryr3)
ryanodine receptor 3 		ENSDART00000077838 (ryr3-201) 29298896-29305325 protein_coding
ENSDART00000147464 (ryr3-001) 29294352-29446621 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003HM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074939-ENSMUSG00000003604 CGP 10090 2:112479171-112634573
GeneTranscriptPositionBiotype
ENSMUSG00000003604 (Aven)
apoptosis, caspase activation inhibitor 		ENSMUST00000003705 (Aven-001) 112492964-112634573 protein_coding
ENSMUST00000099588 (Aven-003) 112559634-112630911 protein_coding
ENSMUST00000127894 (Aven-002) 112559282-112630076 processed_transcript
ENSMUSG00000057378 (Ryr3)
ryanodine receptor 3 		ENSMUST00000080673 (Ryr3-001) 112631380-113217051 protein_coding
ENSMUST00000091818 (Ryr3-201) 112631380-113030331 protein_coding
ENSMUST00000128192 (Ryr3-006) 112996535-113217096 retained_intron
ENSMUST00000134358 (Ryr3-002) 112632046-113217068 processed_transcript
ENSMUST00000137131 (Ryr3-005) 112631355-112652758 processed_transcript
ENSMUST00000142537 (Ryr3-007) 112636628-112640559 processed_transcript
ENSMUST00000146187 (Ryr3-004) 112859286-112908497 retained_intron
ENSMUST00000156757 (Ryr3-003) 112965849-113217062 retained_intron
ENSMUSG00000074939 (Chrm5)
cholinergic receptor, muscarinic 5 		ENSMUST00000099589 (Chrm5-001) 112479171-112480769 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HM_0001ENSDARG00000002894ENSDART00000019759ENSDART00000147064ENSDARG00000069598ENSDART00000101418ENSDART00000156564ENSDARG00000071331ENSDART00000077838ENSDART00000147464CIL_0003HM_0002ENSMUSG00000003604ENSMUST00000003705ENSMUST00000099588ENSMUST00000127894ENSMUSG00000057378ENSMUST00000080673ENSMUST00000091818ENSMUST00000128192ENSMUST00000134358ENSMUST00000137131ENSMUST00000142537ENSMUST00000146187ENSMUST00000156757ENSMUSG00000074939ENSMUST00000099589
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HM_0001ENSDARG00000002894ENSDART00000019759ENSDARG00000069598ENSDART00000101418ENSDART00000156564ENSDARG00000071331ENSDART00000077838ENSDART00000147464CIL_0003HM_0002ENSMUSG00000003604ENSMUST00000003705ENSMUST00000099588ENSMUST00000127894ENSMUSG00000057378ENSMUST00000080673ENSMUST00000091818ENSMUST00000134358ENSMUST00000137131ENSMUSG00000074939ENSMUST00000099589
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002894 ENSDART00000019759 N/A N/A N/A 5.643±0.77 N/A N/A 4.536±0.00 4.806±0.00 0.468±0.00 N/A N/A N/A N/A N/A
ENSDART00000147064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069598 ENSDART00000101418 N/A N/A N/A 0.339±0.12 N/A N/A 0.028±0.00 0.264±0.00 0.015±0.00 N/A N/A N/A N/A N/A
ENSDART00000156564 N/A N/A N/A 0.400±0.00 N/A N/A 0.011±0.00 N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENSDARG00000071331 ENSDART00000077838 N/A N/A N/A N/A N/A N/A 12.187±0.00 N/A N/A N/A 185.228±0.00 N/A N/A N/A
ENSDART00000147464 N/A N/A N/A 0.807±0.03 N/A N/A 2.340±0.00 N/A 0.022±0.00 N/A 38.958±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003604 ENSMUST00000003705 1.126±0.33 0.977±0.22 N/A N/A 0.874±0.20 1.210±0.20 1.054±0.15 1.029±0.11 1.010±0.33 0.886±0.09 0.944±0.08 1.174±0.25 0.593±0.16 10.117±2.74
ENSMUST00000099588 2.606±0.17 N/A N/A N/A 2.234±0.00 3.403±0.00 2.722±0.17 2.671±0.84 1.922±0.15 1.500±0.00 5.077±0.79 21.489±16.90 11.269±9.74 274.241±207.19
ENSMUST00000127894 2.769±1.02 N/A N/A N/A 3.634±0.79 N/A N/A 1.966±0.21 2.092±0.29 N/A N/A N/A N/A N/A
ENSMUSG00000057378 ENSMUST00000080673 N/A N/A N/A 0.636±0.00 N/A 0.417±0.00 0.162±0.04 N/A N/A 0.105±0.00 0.123±0.02 0.427±0.00 N/A N/A
ENSMUST00000091818 N/A N/A N/A 0.674±0.13 N/A 0.266±0.12 0.126±0.00 N/A N/A 0.085±0.00 0.174±0.00 0.404±0.00 N/A N/A
ENSMUST00000128192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134358 0.841±0.33 N/A N/A N/A N/A 0.323±0.19 0.172±0.00 N/A N/A 0.156±0.00 N/A 0.449±0.19 N/A N/A
ENSMUST00000137131 2.444±0.02 N/A 7.893±0.78 5.323±1.91 0.649±0.00 N/A N/A N/A N/A N/A 0.369±0.00 0.739±0.03 0.895±0.00 16.000±0.00
ENSMUST00000142537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074939 ENSMUST00000099589 0.018±0.00 0.039±0.00 0.060±0.01 0.232±0.15 N/A N/A N/A 0.017±0.00 0.006±0.00 0.021±0.00 N/A 0.072±0.03 N/A 0.149±0.07

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