C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099747 B3galnt2-201 ENSMUSG00000039242 10090 + 13:13954674-13999068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099747 7.807±5.21 6.514±3.72 21.435±1.09 13.794±7.26 4.510±1.49 5.834±3.37 5.031±1.56 3.856±1.18 10.259±6.34 6.739±1.10 29.107±4.21 12.344±6.48 10.538±3.48 4.133±1.38

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 ISS endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006486 ISS protein glycosylation
GO:0006493 ISS protein O-linked glycosylation
GO:0008375 ISS acetylglucosaminyltransferase activity
GO:0008376 ISS acetylgalactosaminyltransferase activity
GO:0008378 IEA galactosyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0019276 ISA UDP-N-acetylgalactosamine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313984 B3GALNT2-002 protein_coding Homo_sapiens 0 845
ENST00000366600 B3GALNT2-001 protein_coding Homo_sapiens 0 1688
ENST00000366601 TBCE-001 protein_coding Homo_sapiens 2e-27 128
ENST00000404344 RP11-174C7.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000406207 TBCE-201 protein_coding Homo_sapiens 2e-27 128
ENST00000461994 B3GALNT2-006 retained_intron Homo_sapiens 0 230
ENST00000462374 B3GALNT2-007 processed_transcript Homo_sapiens 2.99878e-43 178
ENST00000465463 TBCE-004 processed_transcript Homo_sapiens 8e-36 154
ENST00000472011 TBCE-002 processed_transcript Homo_sapiens 2e-27 128
ENST00000477694 B3GALNT2-005 retained_intron Homo_sapiens 0 555
ENST00000494378 B3GALNT2-004 processed_transcript Homo_sapiens 0 296
ENST00000543662 TBCE-202 protein_coding Homo_sapiens 2e-27 128
ENST00000612859 B3GALNT2-003 nonsense_mediated_decay Homo_sapiens 0 536

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