C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin folding cofactor E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366601 TBCE-001 ENSG00000116957 9606 + 1:235367360-235448968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366601 2.350±0.00 3.777±0.00 0.331±0.00 2.993±0.75 4.830±0.00 2.758±0.00 5.778±0.00 3.778±2.50 2.343±0.25 1.351±0.00 5.289±4.82 4.059±1.84 6.672±0.59 8.827±0.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 TAS microtubule
GO:0006457 TAS protein folding
GO:0007023 IDA post-chaperonin tubulin folding pathway
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051087 TAS chaperone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039894 Tbce-003 protein_coding Mus_musculus 0 1179
ENSMUST00000162326 Tbce-002 nonsense_mediated_decay Mus_musculus 0 1149
ENSMUST00000159893 Tbce-007 nonsense_mediated_decay Mus_musculus 0 634
ENSMUST00000160553 Tbce-005 retained_intron Mus_musculus 0 444
ENSMUST00000160510 Tbce-014 retained_intron Mus_musculus 0 340
ENSMUST00000099747 B3galnt2-201 protein_coding Mus_musculus 2e-27 128

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