C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099992 Pde11a-001 ENSMUSG00000075270 10090 - 2:75989912-76338774 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000099992
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000099992 0.013±0.00 0.012±0.00 0.117±0.05 0.126±0.05 0.045±0.04 0.296±0.09 0.011±0.00 0.019±0.01 0.135±0.05 0.040±0.02 0.044±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z3 CIL_0000Z3_0002 CGP 2:75978247-76338774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004112 IEA cyclic-nucleotide phosphodiesterase activity
GO:0004118 ISS cGMP-stimulated cyclic-nucleotide phosphodiesterase activity
GO:0005737 IEA cytoplasm
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0030552 IEA cAMP binding
GO:0030553 ISS cGMP binding
GO:0043204 IEA perikaryon
GO:0046069 IEA cGMP catabolic process
GO:0046872 IEA metal ion binding
GO:0047555 IEA 3',5'-cyclic-GMP phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137230 pde11a-001 protein_coding Danio_rerio 0 1208
ENSDART00000093427 pde11a-201 protein_coding Danio_rerio 0 824
ENSDART00000073625 pde5ab-201 protein_coding Danio_rerio 0.00008 55
ENSDART00000138188 pde5ab-001 protein_coding Danio_rerio 0.00008 55
ENST00000286063 PDE11A-001 protein_coding Homo_sapiens 0 3470
ENST00000358450 PDE11A-002 protein_coding Homo_sapiens 0 2407
ENST00000389683 PDE11A-003 protein_coding Homo_sapiens 0 1910
ENST00000409504 PDE11A-004 protein_coding Homo_sapiens 0 2222
ENST00000427127 PDE11A-008 nonsense_mediated_decay Homo_sapiens 3e-26 122
ENST00000433879 PDE11A-006 protein_coding Homo_sapiens 0 1018
ENST00000436700 PDE11A-007 protein_coding Homo_sapiens 0 433
ENST00000466790 PDE11A-009 processed_transcript Homo_sapiens 1.99993e-41 172
ENST00000478646 PDE11A-011 retained_intron Homo_sapiens 0 231
ENST00000488399 PDE11A-010 processed_transcript Homo_sapiens 0 425
ENST00000492761 PDE11A-012 processed_transcript Homo_sapiens 0 584
ENST00000497003 PDE11A-005 processed_transcript Homo_sapiens 0 1727

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