C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000286063 PDE11A-001 ENSG00000128655 9606 - 2:177623252-178072755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000286063
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000286063 0.025±0.00 0.148±0.00 0.030±0.00 0.396±0.19 1.366±1.19 0.101±0.05 0.189±0.15 0.592±0.23 0.255±0.23 0.051±0.02 0.751±0.51 0.066±0.05 0.006±0.00 0.471±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z3 CIL_0000Z3_0001 CGP 2:177612992-178108339

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004112 NAS cyclic-nucleotide phosphodiesterase activity
GO:0004114 TAS:IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004118 IDA cGMP-stimulated cyclic-nucleotide phosphodiesterase activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005829 TAS cytosol
GO:0006198 IEA cAMP catabolic process
GO:0007165 IEA signal transduction
GO:0007596 TAS blood coagulation
GO:0030552 IEA cAMP binding
GO:0030553 IDA cGMP binding
GO:0043204 IEA perikaryon
GO:0046069 IEA cGMP catabolic process
GO:0046872 IEA metal ion binding
GO:0047555 IEA 3',5'-cyclic-GMP phosphodiesterase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099992 Pde11a-001 protein_coding Mus_musculus 0 3470
ENSDART00000137230 pde11a-001 protein_coding Danio_rerio 0 1031
ENSMUST00000144892 Pde11a-002 protein_coding Mus_musculus 0 1018
ENSDART00000093427 pde11a-201 protein_coding Danio_rerio 0 769
ENSMUST00000030893 Dffb-001 protein_coding Mus_musculus 0.000000002 71
ENSMUST00000124825 Pde11a-003 protein_coding Mus_musculus 3e-21 108

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