C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100050 Klhl41-001 ENSMUSG00000075307 10090 + 2:69670120-69684230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100050
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100050 0.027±0.01 0.063±0.02 0.308±0.02 0.298±0.15 13.572±11.18 0.040±0.00 14.159±1.69 0.665±0.60 0.139±0.22 2.308±1.92 157.884±12.00 0.150±0.07 0.122±0.06 1.435±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HC CIL_0008HC_0002 VISTA 2:69119794-69721610
CIL_0006GN CIL_0006GN_0002 CGP 2:69670120-69713516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 IDA cytoplasm
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005856 IDA cytoskeleton
GO:0016567 IEA protein ubiquitination
GO:0030239 IMP myofibril assembly
GO:0031143 IEA pseudopodium
GO:0031275 IEA regulation of lateral pseudopodium assembly
GO:0031430 IDA M band
GO:0031463 IEA Cul3-RING ubiquitin ligase complex
GO:0033017 IDA sarcoplasmic reticulum membrane
GO:0035914 IDA skeletal muscle cell differentiation
GO:0045661 IMP regulation of myoblast differentiation
GO:2000291 IMP regulation of myoblast proliferation
GO:2001014 IMP regulation of skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284669 KLHL41-001 protein_coding Homo_sapiens 0 2346
ENST00000463400 KLHL41-004 processed_transcript Homo_sapiens 0 699
ENST00000513963 RP11-724O16.1-001 protein_coding Homo_sapiens 0 883

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