C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like family member 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284669 KLHL41-001 ENSG00000239474 9606 + 2:169509702-169526262 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000284669
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000284669 0.400±0.00 0.557±0.08 26.913±20.35 0.273±0.03 34.231±24.82 8.285±0.00 2.952±2.17 920.944±475.61 0.708±0.00 33.586±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GN CIL_0006GN_0001 CGP 2:169509702-169573921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005856 ISS cytoskeleton
GO:0006941 TAS striated muscle contraction
GO:0016567 IDA protein ubiquitination
GO:0030239 ISS myofibril assembly
GO:0031143 IEA pseudopodium
GO:0031275 IEA regulation of lateral pseudopodium assembly
GO:0031430 ISS M band
GO:0031463 IDA Cul3-RING ubiquitin ligase complex
GO:0033017 IDA sarcoplasmic reticulum membrane
GO:0035914 ISS skeletal muscle cell differentiation
GO:0045661 ISS regulation of myoblast differentiation
GO:2000291 ISS regulation of myoblast proliferation
GO:2001014 IEA regulation of skeletal muscle cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100050 Klhl41-001 protein_coding Mus_musculus 0 2346

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