C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein kinase C, gamma
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100301 Prkcg-201 ENSMUSG00000078816 10090 + 7:3303532-3331094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100301
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100301 2.243±2.06 0.135±0.02 1.072±0.00 24.282±32.17 0.140±0.00 0.914±0.00 0.138±0.00 0.068±0.03 1.779±1.02 0.363±0.15 0.288±0.12 0.236±0.10 0.084±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004M7 CIL_0004M7_0002 CGP 7:3289038-3331094
CIL_0005P4 CIL_0005P4_0002 CGP 7:3303532-3368216

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004698 IEA calcium-dependent protein kinase C activity
GO:0004712 ISO protein serine/threonine/tyrosine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 ISS cytosol
GO:0005886 IDA plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006950 IEA response to stress
GO:0007268 IMP synaptic transmission
GO:0007611 IEA learning or memory
GO:0007635 IMP chemosensory behavior
GO:0008270 IEA zinc ion binding
GO:0016310 IEA phosphorylation
GO:0030425 IDA dendrite
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0032425 IEA positive regulation of mismatch repair
GO:0035556 IEA intracellular signal transduction
GO:0042177 IEA negative regulation of protein catabolic process
GO:0043005 IEA neuron projection
GO:0043278 IMP response to morphine
GO:0043524 ISS negative regulation of neuron apoptotic process
GO:0046777 IEA protein autophosphorylation
GO:0048265 IMP response to pain
GO:0048471 ISS perinuclear region of cytoplasm
GO:0060384 IMP innervation
GO:0097060 IDA synaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263431 PRKCG-001 protein_coding Homo_sapiens 0 2719
ENST00000419486 PRKCG-006 protein_coding Homo_sapiens 0 625
ENST00000474397 PRKCG-005 protein_coding Homo_sapiens 0 826
ENST00000479081 PRKCG-004 protein_coding Homo_sapiens 0 568

Loading