C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004M7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179820-ENSG00000126583 CGP 9606 19:53866223-53907652
GeneTranscriptPositionBiotype
ENSG00000126583 (PRKCG)
protein kinase C, gamma 		ENST00000263431 (PRKCG-001) 53882213-53907652 protein_coding
ENST00000419486 (PRKCG-006) 53882229-53889979 protein_coding
ENST00000474397 (PRKCG-005) 53881784-53891827 protein_coding
ENST00000479081 (PRKCG-004) 53879190-53889930 protein_coding
ENSG00000179820 (MYADM)
myeloid-associated differentiation marker 		ENST00000336967 (MYADM-201) 53866357-53876428 protein_coding
ENST00000391768 (MYADM-003) 53869439-53874619 protein_coding
ENST00000391769 (MYADM-002) 53869406-53876435 protein_coding
ENST00000391770 (MYADM-001) 53867883-53876437 protein_coding
ENST00000391771 (MYADM-202) 53867883-53876428 protein_coding
ENST00000414489 (MYADM-007) 53869765-53873969 protein_coding
ENST00000421337 (MYADM-004) 53866223-53874256 protein_coding
ENST00000439000 (MYADM-006) 53867883-53874307 protein_coding
ENST00000448420 (MYADM-005) 53867883-53874094 protein_coding
ENSG00000228323 (AC008753.6)
 ENST00000455835 (AC008753.6-001) 53854581-53869107 antisense
ENSG00000232220 (AC008440.5)
 ENST00000413496 (AC008440.5-001) 53874626-53876049 antisense
CIL_0004M7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000068566-ENSMUSG00000078816 CGP 10090 7:3289038-3331094
GeneTranscriptPositionBiotype
ENSMUSG00000068566 (Myadm)
myeloid-associated differentiation marker 		ENSMUST00000096744 (Myadm-201) 3290556-3299345 protein_coding
ENSMUST00000164553 (Myadm-202) 3289038-3299345 protein_coding
ENSMUSG00000078816 (Prkcg)
protein kinase C, gamma 		ENSMUST00000100301 (Prkcg-201) 3303532-3331094 protein_coding
ENSMUST00000172109 (Prkcg-202) 3303645-3330367 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004M7_0001ENSG00000126583ENST00000263431ENST00000419486ENST00000474397ENST00000479081ENSG00000179820ENST00000336967ENST00000391768ENST00000391769ENST00000391770ENST00000391771ENST00000414489ENST00000421337ENST00000439000ENST00000448420ENSG00000228323ENST00000455835ENSG00000232220ENST00000413496CIL_0004M7_0002ENSMUSG00000068566ENSMUST00000096744ENSMUST00000164553ENSMUSG00000078816ENSMUST00000100301ENSMUST00000172109
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004M7_0001ENSG00000126583ENST00000263431ENST00000474397ENST00000479081ENSG00000179820ENST00000336967ENST00000391768ENST00000391770ENST00000391771ENST00000421337ENST00000448420ENSG00000228323ENST00000455835ENSG00000232220ENST00000413496CIL_0004M7_0002ENSMUSG00000068566ENSMUST00000096744ENSMUST00000164553ENSMUSG00000078816ENSMUST00000100301ENSMUST00000172109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126583 ENST00000263431 0.017±0.00 0.045±0.00 N/A 10.193±6.31 0.072±0.00 0.009±0.00 0.077±0.00 N/A N/A N/A N/A 0.104±0.07 N/A 2.344±0.00
ENST00000419486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A 3.901±0.00
ENST00000479081 N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179820 ENST00000336967 51.557±0.00 11.088±0.00 N/A 2.450±0.00 73.821±0.00 60.858±0.00 19.868±0.00 12.022±0.00 5.448±0.00 55.006±0.00 8.118±0.00 23.452±1.00 21.598±0.00 12.857±2.98
ENST00000391768 N/A N/A N/A 1.916±0.00 N/A 3.844±0.00 21.754±0.00 1.048±0.00 5.070±0.60 N/A N/A 27.380±24.22 45.853±0.00 22.841±0.00
ENST00000391769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000391770 N/A N/A 0.256±0.00 1.581±0.00 6.587±0.00 4.957±0.00 0.974±0.00 N/A 5.678±0.00 15.077±12.96 1.621±0.00 28.236±20.61 73.683±7.15 N/A
ENST00000391771 N/A N/A N/A N/A N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A N/A N/A
ENST00000414489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.307±0.00 N/A N/A N/A
ENST00000439000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448420 N/A N/A 3.054±0.00 N/A 10.821±0.00 N/A 7.842±0.00 6.685±0.00 10.952±0.00 4.069±0.00 N/A N/A N/A N/A
ENSG00000228323 ENST00000455835 0.143±0.00 0.205±0.00 N/A 0.056±0.00 0.216±0.00 N/A 0.049±0.00 N/A N/A 0.155±0.00 N/A 0.277±0.02 N/A 0.628±0.11
ENSG00000232220 ENST00000413496 117.798±0.00 76.915±0.00 5.409±0.00 21.900±0.00 100.557±87.53 89.194±80.58 45.074±0.00 17.548±15.82 16.148±0.96 88.955±77.62 22.511±0.00 49.580±47.23 91.157±31.62 53.554±43.41
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000068566 ENSMUST00000096744 125.761±50.18 22.879±5.46 131.674±11.42 3.064±2.44 67.078±33.19 86.826±44.81 61.856±24.03 7.236±2.97 27.465±24.14 103.010±61.28 4.246±0.66 49.714±27.66 37.748±30.42 2.285±2.07
ENSMUST00000164553 24.427±0.00 10.494±1.97 14.905±1.52 6.518±2.63 25.425±0.00 N/A 26.065±9.63 4.606±0.00 5.556±1.19 N/A 1.418±0.00 N/A 10.045±0.54 0.034±0.00
ENSMUSG00000078816 ENSMUST00000100301 2.243±2.06 0.135±0.02 1.072±0.00 24.282±32.17 N/A 0.140±0.00 0.914±0.00 0.138±0.00 0.068±0.03 1.779±1.02 0.363±0.15 0.288±0.12 0.236±0.10 0.084±0.06
ENSMUST00000172109 0.973±0.00 N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 0.409±0.00 N/A 0.102±0.06 0.108±0.02

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