C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NYN domain and retroviral integrase containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100529 Nynrin-201 ENSMUSG00000075592 10090 + 14:55854036-55874291 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100529 1.490±0.98 0.621±0.07 1.257±0.00 1.637±0.51 0.611±0.10 0.461±0.13 0.297±0.04 0.596±0.05 0.218±0.18 1.264±0.09 0.147±0.05 1.855±0.76 2.053±0.32 0.063±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005E9 CIL_0005E9_0002 CGP 14:55824795-55874735
CIL_0004O9 CIL_0004O9_0002 CGP 14:55854036-55884256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015074 IEA DNA integration
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382554 NYNRIN-001 protein_coding Homo_sapiens 0 3611
ENST00000554505 NYNRIN-003 processed_transcript Homo_sapiens 0 412

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