C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selectin, platelet (p-selectin) ligand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100874 Selplg-201 ENSMUSG00000048163 10090 - 5:113817798-113830501 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100874
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100874 7.278±2.97 5.487±0.44 1.865±0.32 1.324±1.60 58.670±33.07 7.735±1.74 2.237±1.18 3.566±1.32 3.186±1.82 22.288±8.19 0.569±0.70 6.127±2.27 0.608±0.47 0.549±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M8 CIL_0001M8_0002 CGP 5:113793729-113830501
CIL_0001VQ CIL_0001VQ_0002 CGP 5:113817798-113908758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding
GO:0050901 IMP leukocyte tethering or rolling
GO:0050902 IMP leukocyte adhesive activation
GO:0071354 IEA cellular response to interleukin-6

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228463 SELPLG-002 protein_coding Homo_sapiens 0 274
ENST00000388962 SELPLG-201 protein_coding Homo_sapiens 0 274
ENST00000550948 SELPLG-001 protein_coding Homo_sapiens 0 274

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