C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selectin P ligand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550948 SELPLG-001 ENSG00000110876 9606 - 12:108622277-108633959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000550948
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000550948 6.796±0.00 19.130±0.00 0.094±0.00 2.806±0.08 4.346±2.65 1.062±0.60 1.578±0.99 1.406±1.30 1.686±0.41 15.001±12.10 0.452±0.00 2.777±1.93 12.584±2.02 2.059±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M8 CIL_0001M8_0001 CGP 12:108589846-108633959
CIL_0001VQ CIL_0001VQ_0001 CGP 12:108622277-108731596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 NAS receptor binding
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007155 TAS cell adhesion
GO:0007596 TAS blood coagulation
GO:0016020 TAS membrane
GO:0016021 TAS integral component of membrane
GO:0050900 TAS leukocyte migration
GO:0050902 ISS leukocyte adhesive activation
GO:0071354 IDA cellular response to interleukin-6

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100874 Selplg-201 protein_coding Mus_musculus 0 274

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