C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanylate binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100962 Gbp4-201 ENSMUSG00000079363 10090 - 5:105115767-105139586 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100962
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100962 5.152±0.06 2.308±0.50 7.865±0.00 0.491±0.17 9.138±2.43 1.264±0.56 1.706±0.35 2.491±0.70 0.894±0.44 8.431±0.40 1.037±0.26 3.519±1.73 0.826±0.44 0.193±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_000B CGP 5:105014153-105139540
CIL_000033 CIL_000033_000A CGP 5:105078394-105139586
CIL_000033 CIL_000033_000E CGP 5:105115767-105293699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0001933 IDA negative regulation of protein phosphorylation
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0031397 IGI negative regulation of protein ubiquitination
GO:0032687 IMP negative regulation of interferon-alpha production
GO:0042308 IDA negative regulation of protein import into nucleus
GO:0050688 IMP regulation of defense response to virus
GO:0071346 IDA cellular response to interferon-gamma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370456 GBP6-001 protein_coding Homo_sapiens 0 1055

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