C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled receptor 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101122 Gpr27-201 ENSMUSG00000072875 10090 + 6:99692679-99693818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101122 2.593±1.69 2.619±0.61 3.809±0.35 10.078±1.07 1.408±0.99 2.372±0.53 0.914±0.07 0.671±0.09 0.065±0.07 1.647±0.85 0.263±0.25 5.613±2.76 0.580±0.40 0.141±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ML CIL_0008ML_0002 VISTA 6:99094912-99696384
CIL_0008XU CIL_0008XU_0002 VISTA 6:99103919-99705378
CIL_0008EM CIL_0008EM_0002 VISTA 6:99166876-99767819
CIL_0007YY CIL_0007YY_0002 VISTA 6:99183861-99786227
CIL_00088J CIL_00088J_0002 VISTA 6:99586863-100189372
CIL_0003B1 CIL_0003B1_0002 CGP 6:99625135-99693818
CIL_0001TB CIL_0001TB_0003 CGP 6:99692679-99726392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304411 GPR27-001 protein_coding Homo_sapiens 0 1646
ENST00000421769 EIF4E3-004 protein_coding Homo_sapiens 0 233
ENST00000448225 EIF4E3-202 protein_coding Homo_sapiens 0 287
ENST00000496214 EIF4E3-005 protein_coding Homo_sapiens 0 287

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