C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007YY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1010 VISTA 9606 3:71241746-71843635
GeneTranscriptPositionBiotype
ENSG00000163412 (EIF4E3)
eukaryotic translation initiation factor 4E family member 3 		ENST00000295612 (EIF4E3-002) 71682727-71753624 protein_coding
ENST00000389826 (EIF4E3-201) 71679291-71729118 protein_coding
ENST00000421769 (EIF4E3-004) 71684682-71754773 protein_coding
ENST00000425534 (EIF4E3-001) 71675416-71725375 protein_coding
ENST00000448225 (EIF4E3-202) 71679289-71754383 protein_coding
ENST00000468147 (EIF4E3-010) 71684620-71728637 processed_transcript
ENST00000469524 (EIF4E3-008) 71693897-71728720 protein_coding
ENST00000481525 (EIF4E3-009) 71684541-71728650 processed_transcript
ENST00000496214 (EIF4E3-005) 71693875-71754383 protein_coding
ENST00000497838 (EIF4E3-007) 71690041-71729197 protein_coding
ENSG00000163421 (PROK2)
prokineticin 2 		ENST00000295619 (PROK2-002) 71772101-71785061 protein_coding
ENST00000353065 (PROK2-001) 71771656-71785206 protein_coding
ENSG00000170837 (GPR27)
G protein-coupled receptor 27 		ENST00000304411 (GPR27-001) 71754050-71756496 protein_coding
ENSG00000242094 (FOXP1-IT1)
FOXP1 intronic transcript 1 (non-protein coding) 		ENST00000498714 (FOXP1-IT1-001) 71570255-71574457 sense_intronic
ENSG00000244203 (FOXP1-AS1)
FOXP1 antisense RNA 1 		ENST00000465742 (FOXP1-AS1-001) 71289769-71305853 antisense
ENSG00000270562 (RP11-154H23.3)
 ENST00000604491 (RP11-154H23.3-001) 71584943-71587409 lincRNA
ENSG00000274387 (RP11-154H23.5)
 ENST00000615819 (RP11-154H23.5-001) 71567863-71571112 antisense
ENSG00000277539 (RP11-298C2.1)
 ENST00000620572 (RP11-298C2.1-001) 71276087-71289616 sense_intronic
CIL_0007YY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1010 VISTA 10090 6:99183861-99786227
GeneTranscriptPositionBiotype
ENSMUSG00000030069 (Prok2)
prokineticin 2 		ENSMUST00000008273 (Prok2-201) 99711299-99726392 protein_coding
ENSMUST00000032152 (Prok2-202) 99711299-99726392 protein_coding
ENSMUST00000101120 (Prok2-203) 99711299-99726392 protein_coding
ENSMUSG00000072875 (Gpr27)
G protein-coupled receptor 27 		ENSMUST00000101122 (Gpr27-201) 99692679-99693818 protein_coding
ENSMUSG00000084547 (Gm24936)
predicted gene, 24936 		ENSMUST00000122598 (Gm24936-201) 99575891-99576137 misc_RNA
ENSMUSG00000093559 (Gm20705)
predicted gene 20705 		ENSMUST00000177278 (Gm20705-001) 99384607-99388499 sense_intronic
ENSMUSG00000093661 (Eif4e3)
eukaryotic translation initiation factor 4E member 3 		ENSMUST00000032151 (Eif4e3-001) 99625135-99666771 protein_coding
ENSMUSG00000097548 (Gm26748)
predicted gene, 26748 		ENSMUST00000180406 (Gm26748-201) 99725771-99732553 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YY_0001ENSG00000163412ENST00000295612ENST00000389826ENST00000421769ENST00000425534ENST00000448225ENST00000468147ENST00000469524ENST00000481525ENST00000496214ENST00000497838ENSG00000163421ENST00000295619ENST00000353065ENSG00000170837ENST00000304411ENSG00000242094ENST00000498714ENSG00000244203ENST00000465742ENSG00000270562ENST00000604491ENSG00000274387ENST00000615819ENSG00000277539ENST00000620572CIL_0007YY_0002ENSMUSG00000030069ENSMUST00000008273ENSMUST00000032152ENSMUST00000101120ENSMUSG00000072875ENSMUST00000101122ENSMUSG00000084547ENSMUST00000122598ENSMUSG00000093559ENSMUST00000177278ENSMUSG00000093661ENSMUST00000032151ENSMUSG00000097548ENSMUST00000180406
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007YY_0001ENSG00000163412ENST00000295612ENST00000389826ENST00000425534ENST00000448225ENST00000468147ENST00000497838ENSG00000163421ENST00000295619ENST00000353065ENSG00000170837ENST00000304411ENSG00000242094ENST00000498714ENSG00000244203ENST00000465742ENSG00000270562ENST00000604491ENSG00000274387ENST00000615819ENSG00000277539ENST00000620572CIL_0007YY_0002ENSMUSG00000030069ENSMUST00000008273ENSMUST00000032152ENSMUST00000101120ENSMUSG00000072875ENSMUST00000101122ENSMUSG00000084547ENSMUST00000122598ENSMUSG00000093559ENSMUST00000177278ENSMUSG00000093661ENSMUST00000032151ENSMUSG00000097548ENSMUST00000180406
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163412 ENST00000295612 10.776±0.00 5.219±0.00 0.495±0.00 5.128±3.18 8.118±5.42 6.094±4.29 3.170±1.92 1.802±1.39 3.157±1.90 6.360±0.00 3.163±0.79 3.519±2.10 2.223±0.85 3.667±1.35
ENST00000389826 3.432±0.00 2.634±0.00 0.568±0.00 2.154±0.00 1.936±0.00 2.527±0.00 1.194±0.00 0.197±0.00 1.999±0.00 2.564±0.00 0.970±0.00 1.074±1.12 1.022±0.06 0.609±0.00
ENST00000421769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425534 N/A 0.435±0.00 N/A 1.464±0.32 0.427±0.00 N/A 0.225±0.00 0.284±0.00 N/A N/A 0.166±0.00 0.094±0.00 N/A N/A
ENST00000448225 1.946±0.00 N/A N/A 2.374±0.00 7.870±0.00 4.677±0.00 3.145±0.00 2.317±0.00 0.921±0.00 3.669±0.00 4.266±0.00 1.799±0.00 0.877±0.00 2.350±0.00
ENST00000468147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.580±0.00 N/A N/A
ENST00000469524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497838 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.100±0.00 N/A 2.568±0.00 N/A N/A
ENSG00000163421 ENST00000295619 N/A N/A N/A 0.154±0.00 N/A N/A 0.044±0.00 N/A N/A N/A 0.079±0.00 0.033±0.02 0.373±0.00 4.334±0.00
ENST00000353065 0.413±0.00 0.079±0.00 N/A 0.090±0.00 0.056±0.02 0.168±0.00 0.150±0.00 0.035±0.00 0.195±0.00 3.246±2.85 N/A 0.042±0.02 0.605±0.04 2.369±0.63
ENSG00000170837 ENST00000304411 N/A N/A N/A 13.810±0.00 N/A N/A N/A 3.971±0.00 N/A N/A N/A 5.325±2.08 3.020±1.89 9.419±0.16
ENSG00000242094 ENST00000498714 N/A 0.049±0.00 0.452±0.00 0.167±0.16 0.445±0.42 0.984±0.00 0.093±0.07 0.192±0.17 N/A 1.728±0.00 0.021±0.00 0.090±0.08 0.066±0.00 0.064±0.06
ENSG00000244203 ENST00000465742 0.242±0.00 0.952±0.00 N/A 0.041±0.00 N/A 0.153±0.00 0.093±0.00 0.143±0.00 0.035±0.00 0.194±0.00 0.018±0.00 0.204±0.02 N/A 1.632±0.53
ENSG00000270562 ENST00000604491 0.027±0.00 0.114±0.00 N/A 0.022±0.01 0.169±0.10 0.167±0.12 0.061±0.04 0.260±0.00 0.419±0.00 0.164±0.15 N/A 0.038±0.02 0.027±0.02 0.046±0.03
ENSG00000274387 ENST00000615819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENSG00000277539 ENST00000620572 N/A 0.273±0.00 0.724±0.00 N/A 0.106±0.00 N/A 0.024±0.00 0.166±0.00 N/A N/A N/A 0.405±0.00 0.239±0.00 0.515±0.33
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030069 ENSMUST00000008273 N/A N/A N/A 0.064±0.04 N/A N/A N/A N/A 0.032±0.02 N/A N/A 0.161±0.14 0.010±0.01 N/A
ENSMUST00000032152 N/A N/A N/A N/A N/A N/A 0.011±0.00 0.069±0.04 N/A N/A N/A 0.375±0.27 N/A 0.427±0.00
ENSMUST00000101120 0.094±0.02 N/A N/A 0.034±0.00 N/A N/A 0.011±0.00 0.041±0.02 0.072±0.02 N/A N/A 0.333±0.00 N/A 13.806±5.98
ENSMUSG00000072875 ENSMUST00000101122 2.593±1.69 2.619±0.61 3.809±0.35 10.078±1.07 1.408±0.99 2.372±0.53 0.914±0.07 0.671±0.09 0.065±0.07 1.647±0.85 0.263±0.25 5.613±2.76 0.580±0.40 0.141±0.04
ENSMUSG00000084547 ENSMUST00000122598 N/A N/A N/A 0.110±0.00 N/A N/A N/A N/A N/A 1.355±0.00 N/A N/A 0.071±0.00 0.392±0.01
ENSMUSG00000093559 ENSMUST00000177278 0.059±0.02 0.052±0.00 0.067±0.04 0.080±0.04 0.155±0.11 0.079±0.08 0.049±0.04 0.046±0.02 0.032±0.01 0.069±0.03 N/A 0.125±0.09 0.030±0.01 0.015±0.00
ENSMUSG00000093661 ENSMUST00000032151 27.302±8.53 18.454±0.00 26.705±2.18 10.165±0.19 21.135±1.39 N/A 17.135±1.70 6.896±1.42 2.832±0.85 21.852±0.58 12.510±1.05 13.380±4.58 6.950±1.96 0.808±0.00
ENSMUSG00000097548 ENSMUST00000180406 0.088±0.05 N/A 0.018±0.00 0.063±0.03 0.058±0.02 0.067±0.02 0.029±0.02 0.060±0.04 0.018±0.01 0.088±0.03 0.014±0.00 0.088±0.03 0.022±0.01 0.152±0.06

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