C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101227 Zcchc18-002 ENSMUSG00000031428 10090 + X:136993159-136996116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101227
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101227 0.309±0.20 2.030±0.92 45.534±38.74 0.471±0.17 0.688±0.40 0.152±0.05 0.216±0.12 0.070±0.04 0.148±0.07 0.030±0.02 0.895±0.64 0.063±0.03 0.538±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000721 CIL_000721_0002 CGP X:136974022-137038302
CIL_00012D CIL_00012D_0002 CGP X:136981116-137038302
CIL_000531 CIL_000531_0002 CGP X:136993155-137082503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0016607 IBA nuclear speck
GO:0030374 IBA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IBA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000537356 ZCCHC18-006 protein_coding Homo_sapiens 0 815
ENST00000611638 ZCCHC18-201 protein_coding Homo_sapiens 0 815

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