C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 9B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101270 Tbc1d9b-002 ENSMUSG00000036644 10090 + 11:50131396-50172785 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101270 12.083±1.28 25.281±4.21 6.313±0.26 6.689±0.33 9.463±1.63 4.994±0.77 5.113±0.32 8.361±0.55 3.517±1.44 10.874±1.97 2.950±0.54 11.103±1.32 2.777±0.38 1.681±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000143909 tbc1d9-001 protein_coding Danio_rerio 0 496
ENSDART00000083799 tbc1d9-201 protein_coding Danio_rerio 0 457
ENST00000355235 TBC1D9B-002 protein_coding Homo_sapiens 0 3598
ENST00000356834 TBC1D9B-001 protein_coding Homo_sapiens 0 4349
ENST00000517782 TBC1D9B-018 processed_transcript Homo_sapiens 0 226
ENST00000518085 TBC1D9B-008 processed_transcript Homo_sapiens 0 667
ENST00000518120 TBC1D9B-014 processed_transcript Homo_sapiens 0 224
ENST00000518459 TBC1D9B-011 retained_intron Homo_sapiens 0 996
ENST00000519746 TBC1D9B-005 protein_coding Homo_sapiens 0 676
ENST00000519757 TBC1D9B-004 retained_intron Homo_sapiens 0 553
ENST00000520794 TBC1D9B-007 retained_intron Homo_sapiens 0 676
ENST00000521469 TBC1D9B-003 retained_intron Homo_sapiens 0 676
ENST00000522029 TBC1D9B-016 processed_transcript Homo_sapiens 0 508
ENST00000522180 TBC1D9B-013 processed_transcript Homo_sapiens 0 525
ENST00000522224 TBC1D9B-017 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000522921 TBC1D9B-012 retained_intron Homo_sapiens 0 427
ENST00000524222 TBC1D9B-009 protein_coding Homo_sapiens 0 540

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