C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Casitas B-lineage lymphoma-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101499 Cbll1-001 ENSMUSG00000020659 10090 - 12:31484936-31499616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101499
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101499 2.088±0.58 2.131±1.27 2.356±0.15 4.461±1.18 3.008±1.13 2.701±0.54 1.489±0.33 2.407±0.31 1.919±0.48 3.589±0.32 1.446±0.19 3.431±1.34 2.036±0.57 6.286±2.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0002 VISTA 12:31009963-31611477
CIL_0001G3 CIL_0001G3_0002 CGP 12:31390871-31499616

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0007162 IDA negative regulation of cell adhesion
GO:0008270 IEA zinc ion binding
GO:0016337 IEA single organismal cell-cell adhesion
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030335 IDA positive regulation of cell migration
GO:0042802 IPI identical protein binding
GO:0045807 IDA positive regulation of endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222597 CBLL1-014 protein_coding Homo_sapiens 0 2569
ENST00000415884 CBLL1-009 protein_coding Homo_sapiens 0 669
ENST00000420796 CBLL1-006 protein_coding Homo_sapiens 0 1637
ENST00000432748 CBLL1-011 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000440859 CBLL1-004 protein_coding Homo_sapiens 0 2712
ENST00000479443 CBLL1-010 retained_intron Homo_sapiens 0 318
ENST00000487517 CBLL1-013 retained_intron Homo_sapiens 0 616
ENST00000493361 CBLL1-012 retained_intron Homo_sapiens 0 475

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