C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440859 CBLL1-004 ENSG00000105879 9606 + 7:107743697-107761667 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000440859
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000440859 2.080±0.00 2.582±0.78 2.770±0.12 2.914±0.63 2.571±1.03 3.238±0.00 3.208±0.00 3.153±0.91 4.031±2.31 5.084±1.11 2.455±0.65 3.845±1.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZV CIL_0008ZV_0001 VISTA 7:107646717-108248447

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IC ubiquitin ligase complex
GO:0003676 IEA nucleic acid binding
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0007162 ISS negative regulation of cell adhesion
GO:0008270 IEA zinc ion binding
GO:0016337 IDA single organismal cell-cell adhesion
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030335 ISS positive regulation of cell migration
GO:0042802 IEA identical protein binding
GO:0045807 ISS positive regulation of endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101499 Cbll1-001 protein_coding Mus_musculus 0 2712
ENSMUST00000085487 Cbll1-202 protein_coding Mus_musculus 0 1435
ENSMUST00000185739 Cbll1-003 protein_coding Mus_musculus 0 1212
ENSMUST00000064240 Cbll1-201 protein_coding Mus_musculus 0 1208
ENSMUST00000188326 Cbll1-002 protein_coding Mus_musculus 0 1168

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