C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUZ RNA binding domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102487 Szrd1-001 ENSMUSG00000040842 10090 - 4:141113001-141139766 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102487
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102487 3.410±0.79 11.415±1.07 5.312±2.41 2.385±0.00 2.185±0.44 3.636±0.57 3.940±1.13 4.499±0.36 17.016±3.25 8.011±4.56 5.501±2.44 1.539±0.53

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000401088 SZRD1-001 protein_coding Homo_sapiens 0 1635
ENST00000401089 SZRD1-005 protein_coding Homo_sapiens 0 1411
ENST00000466212 SPATA21-003 processed_transcript Homo_sapiens 0 220
ENST00000471507 SZRD1-007 protein_coding Homo_sapiens 0 1081
ENST00000472351 SZRD1-004 processed_transcript Homo_sapiens 0 952
ENST00000472461 SZRD1-003 processed_transcript Homo_sapiens 0 771
ENST00000475078 SZRD1-010 processed_transcript Homo_sapiens 0 228
ENST00000475554 SZRD1-008 processed_transcript Homo_sapiens 0 665
ENST00000476423 SZRD1-011 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000486763 SZRD1-009 processed_transcript Homo_sapiens 0 612
ENST00000492354 SZRD1-006 protein_coding Homo_sapiens 0 1406
ENST00000541551 RP11-611O2.2-001 processed_pseudogene Homo_sapiens 0 381

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