C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gem (nuclear organelle) associated protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102500 Gemin4-001 ENSMUSG00000049396 10090 - 11:76210571-76217664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102500 6.353±1.94 4.334±0.85 4.780±0.85 11.160±1.97 5.602±0.79 7.659±1.21 2.055±0.18 3.431±0.08 4.986±2.03 5.089±0.25 2.402±0.00 8.303±1.16 7.329±2.25 17.948±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QB CIL_0001QB_0002 CGP 11:76179671-76217664

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 IEA spliceosomal snRNP assembly
GO:0005515 IEA protein binding
GO:0005829 IEA cytosol
GO:0016020 IEA membrane
GO:0032797 IEA SMN complex
GO:0034719 IEA SMN-Sm protein complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319004 GEMIN4-001 protein_coding Homo_sapiens 0 2772
ENST00000437269 GEMIN4-003 protein_coding Homo_sapiens 0 579
ENST00000570364 GEMIN4-005 protein_coding Homo_sapiens 0 710
ENST00000573482 GEMIN4-007 protein_coding Homo_sapiens 0 789
ENST00000576383 GEMIN4-004 protein_coding Homo_sapiens 0 575
ENST00000576778 GEMIN4-002 protein_coding Homo_sapiens 0 2730

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